rs1855640 chr10:36808902 T>C
- Sequence
aaatttgttagctcccaatgctga[T/C]gggaccaattccagttttcctagt
- ASB in cell types
- BIN-67 (Ovarian small cell carcinoma, hypercalcemic type) HS-SY-2(Monophasic synovial sarcoma)
- ASB for transcription factors
- REQU_HUMAN SMRC1_HUMAN SSXT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | 2.18 | -1.26 | 1.50 | n/a | n/a | |||
| SMRC1_HUMAN | 1.76 | -0.23 | 1.50 | n/a | n/a | |||
| SSXT_HUMAN | 1.68 | -1.35 | 1.50 | n/a | n/a |
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