rs1857499 chr9:88741608 C>T
- Sequence
caaataagtgggacacctgggatg[C/T]tgtattggatatttgcggttgagt
- ASB in cell types
- bipolar neuron LNCaP C4-2B (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line) IPSC-derived bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.33 | 0.40 | 1.58 | n/a | No Hit | |||
| RAD21_HUMAN | 1.70 | -0.33 | 1.00 | n/a | n/a |
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