rs1859330 chr12:112938583 G>A

Sequence
cgctggacaggttcgtggccagaa[G/A]gctgcagccgcggaaggagttcgt
ASB in cell types
primary B-CLL cells keratinocytes
ASB for transcription factors
NRF1_HUMAN SNAI2_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN 1.01 n/a 1.1·10-41.00 2.00 n/a No Hit
SNAI2_HUMAN n/a 2.58 1.000.01 1.50 n/a No Hit
BRD4_HUMAN -0.24 2.78 0.920.03 1.67 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Whole_Blood

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