rs1859331 chr12:112938526 C>A
- Sequence
gcttccccttgcacctgcgccggg[C/A]ggccatggacttgtacagcacccc
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- NRF1_HUMAN SNAI2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 1.33 | n/a | 2.00 | 0.08 | Weak Discordant | |||
| SNAI2_HUMAN | -2.16 | 2.54 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.96 | 0.16 | 1.22 | -0.58 | Weak Concordant |
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Motif analysis
