rs1859853 chr7:25759962 G>T

Sequence
caatgggcctaaagagacgcagga[G/T]tccactgaggaaggaaggagaggg
ASB in cell types
2102EP (Embryonal carcinoma)
ASB for transcription factors
SOX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SOX2_HUMAN n/a 3.51 1.003.4·10-4 2.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis,  Heart_Atrial_Appendage

Download