rs1860343 chr12:4604543 T>C

Sequence
gctccctttctaacttgataactc[T/C]cttgccaagtcacaagactcagaa
ASB in cell types
2588 (Lymphoblastoid Cell Lines)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
2588 (Lymphoblastoid Cell Lines) -1.02 1.34 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP spine bone mineral density (bmd),  sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Testis,  Thyroid,  Whole_Blood

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