rs1860467 chr7:51606924 A>C

Sequence
ctttatgagtattgactcattcct[A/C]ttaaaacctgtgaggaatggacca
ASB in cell types
VCaP (prostate carcinoma) HEK293 (embryonic kidney)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN BCOR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 3.52 -0.39 4.5·10-130.95 1.80 n/a No Hit
ANDR_HUMAN 2.68 -0.47 1.0·10-51.00 3.00 n/a No Hit
BCOR_HUMAN 2.72 -4.72 0.021.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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