rs1860947 chr12:21501710 C>A
- Sequence
tggtcaaggggtgtggtcaccatg[C/A]gcgtcaccgaacaacattacgagt
- ASB in cell types
- breast tumor GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ESR1_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | n/a | 3.04 | 2.00 | 1.58 | Weak Concordant | |||
| TBX21_HUMAN | -2.13 | 2.27 | 1.00 | n/a | No Hit |
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Motif analysis
