rs1861631 chr2:216741202 A>C
- Sequence
ggggtttcggcagcagtagctgaa[A/C]acacaccagggacttcttatttct
- ASB in cell types
- breast tumor
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.18 | 0.97 | 1.50 | 1.43 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, college completion, diastolic blood pressure (dbp), rheumatoid arthritis, serum creatinine, systolic blood pressure (sbp)