rs1861835 chr12:5428946 G>A
- Sequence
ttccaaccacagagtggtgctatt[G/A]caaaagataagggtaaccagaagg
- ASB in cell types
- hASC (preadipocytes) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.45 | -0.04 | 1.32 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, college completion, neuroticism, tetrology of fallot, waist hip ratio