rs1862472 chr19:9847181 C>A
- Sequence
cagtcacaccacacacaccacgtg[C/A]acacacacgcagccctccccactt
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) HKC8 (kidney proximal tubule cell line) K562 (myelogenous leukemia)
- ASB for transcription factors
- JUN_HUMAN MYCN_HUMAN E2F8_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.69 | 0.69 | 2.10 | n/a | No Hit | |||
| MYCN_HUMAN | 1.57 | -0.71 | 1.00 | -1.54 | Weak Concordant | |||
| E2F8_HUMAN | 2.27 | 0.12 | 1.50 | n/a | No Hit |
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Motif analysis
