rs1862577 chr5:37721763 G>A
- Sequence
caaaagtctgaaaacgtaactaga[G/A]gttcagtcatttcctcagttattt
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.87 | -0.70 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, chronic kidney disease, microalbuminuria, rheumatoid arthritis, tetrology of fallot, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Whole_Blood