rs1864078 chr19:40598852 G>C

Sequence
cggggttctagattcccagacagt[G/C]cgggcttagaaatgctcttagaaa
ASB in cell types
THP-1 (acute monocytic leukemia) GBM39 (Human brain tumor)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
THP-1 (acute monocytic leukemia) 0.81 0.80 0.520.02 1.02
GBM39 (Human brain tumor) 1.07 -0.40 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  fasting blood glucose
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Lung,  Nerve_Tibial,  Spleen,  Whole_Blood

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