rs1864434 chr2:43158552 T>C
- Sequence
agaaatgccacatgtacacgcatg[T/C]gtgtgcacacacacacaaacaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- NRF1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -2.13 | 2.27 | 1.00 | 1.92 | Weak Concordant | |||
| GCR_HUMAN | 0.52 | 0.87 | 1.00 | n/a | No Hit |
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Motif analysis
