rs1864657 chr21:27785553 C>T
- Sequence
gacctgtgtacttggcctaagtca[C/T]tgtttattctcagatctcatctgc
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.14 | 1.27 | 2.00 | 1.72 | Weak Concordant |
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Motif analysis
