rs1864914 chr3:194870940 C>T
- Sequence
ggacatctgaggtcatgaactgag[C/T]gggcgtgtgctgctgagtcaactc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- EGR1_HUMAN PKNX1_HUMAN FOXA1_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | n/a | 3.65 | 2.00 | 5.97 | Concordant | |||
| PKNX1_HUMAN | -4.38 | 2.66 | 1.50 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.05 | 1.17 | 1.63 | n/a | No Hit | |||
| ESR1_HUMAN | -0.13 | 0.83 | 1.64 | n/a | No Hit |
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Motif analysis
