rs1864987 chr5:167126657 A>G
- Sequence
aaaaataaacacaactgtaatgac[A/G]tcaccagatagatctgcttggaat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | n/a | 4.26 | 2.00 | 4.83 | Concordant | |||
| ATF7_HUMAN | n/a | 2.99 | 2.00 | 1.91 | Weak Concordant |
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Motif analysis
