rs1865071 chr19:3877020 A>G

Sequence
tcgcaccagcctgggtgacagagc[A/G]agcctctgtctcaaagggaaaaaa
ASB in cell types
HL-60 (acute myeloid leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
REST_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN 1.89 -0.01 3.4·10-61.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Frontal_Cortex_BA9,  Spleen,  Testis,  Whole_Blood

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