rs1866710 chr11:12853765 A>G
- Sequence
ttcctctaagatgcgggagaacac[A/G]gtgttctatggagttgtcacatga
- ASB in cell types
- VCaP (prostate carcinoma) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- GATA1_HUMAN ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | n/a | 2.81 | 3.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.53 | 0.70 | 1.81 | -0.92 | Weak Concordant | |||
| FOXA1_HUMAN | 1.77 | -0.10 | 2.00 | n/a | No Hit |
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Motif analysis
