rs1867114 chr11:20080158 C>T

Sequence
caacagtgccaccagccactccag[C/T]gtgggcagcaacatagagagtgac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RING2_HUMAN TAL1_HUMAN HDAC1_HUMAN MTG8R_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN 3.16 n/a 6.7·10-31.00 2.00 n/a n/a
TAL1_HUMAN 2.71 -1.91 0.011.00 2.00 n/a No Hit
HDAC1_HUMAN 2.32 -1.70 0.021.00 2.00 n/a n/a
MTG8R_HUMAN 2.79 n/a 0.021.00 2.00 n/a n/a
REQU_HUMAN 2.66 -1.87 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Lung,  Nerve_Tibial

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