rs1867115 chr11:20080198 C>A
- Sequence
gagagtgactcaaagaagaagaag[C/A]ggaagaactgggtgagtgcacatc
- ASB in cell types
- K562 (myelogenous leukemia) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- SMCA4_HUMAN KDM1A_HUMAN MEIS2_HUMAN MTG8R_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 3.37 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 3.43 | n/a | 2.00 | n/a | n/a | |||
| MEIS2_HUMAN | 3.12 | -5.64 | 2.00 | n/a | No Hit | |||
| MTG8R_HUMAN | 2.75 | n/a | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.70 | -2.57 | 1.00 | -1.47 | Weak Concordant |
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Motif analysis
