rs1867116 chr11:20080378 T>G
- Sequence
atgggtttttactaaaatcaatat[T/G]gtactcagcaaaacactagaatct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN IKZF1_HUMAN NFIC_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 3.44 | n/a | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.62 | -1.59 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 3.19 | n/a | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 3.17 | n/a | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 3.03 | -5.36 | 2.00 | n/a | n/a |
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