rs1867353 chr22:17876477 C>G
- Sequence
tggcagttacctggtacttcaaca[C/G]cctctgcttgagacactcagccag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 2.98 | -2.64 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.43 | 0.96 | 1.55 | -2.62 | Concordant |
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Motif analysis
