rs1867865 chr2:209351817 T>C
- Sequence
atgggaggtttatcttttcctcca[T/C]tggggaagctctctaatggccaaa
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- FEZF1_HUMAN GLIS1_HUMAN PKNX1_HUMAN ZIC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FEZF1_HUMAN | -5.00 | 3.61 | 1.33 | n/a | No Hit | |||
| GLIS1_HUMAN | n/a | 2.95 | 1.50 | 2.72 | Concordant | |||
| PKNX1_HUMAN | n/a | 3.53 | 2.00 | n/a | No Hit | |||
| ZIC2_HUMAN | -3.54 | 2.22 | 1.33 | n/a | No Hit |
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Motif analysis
