rs1868278 chr8:141022705 T>A
- Sequence
aagtatttctggccgggcgtggtg[T/A]ctcatgcctgtcatctcagcactt
- ASB in cell types
- Kasumi-1 (acute myeloblastic leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ATF3_HUMAN MTG8_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 3.15 | 2.00 | 5.99 | Concordant | |||
| MTG8_HUMAN | n/a | 3.11 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 0.08 | 2.57 | 2.00 | n/a | No Hit |
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Motif analysis
