rs1868391 chr2:45974045 A>G
- Sequence
aaaataacctgcatcctgtgtcct[A/G]tgatgcccaggatgatgtttctgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFAC3_HUMAN IKZF2_HUMAN IKZF1_HUMAN ZN592_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC3_HUMAN | -3.30 | 3.46 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.00 | 2.06 | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | -1.95 | 2.07 | 2.50 | n/a | n/a | |||
| ZN592_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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