rs1868392 chr2:45974198 A>G
- Sequence
tacacattgtgaaagtatgaagcg[A/G]aacaaaaacttgcctatgatggca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN ZN592_HUMAN SKIL_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | n/a | 3.84 | 1.50 | n/a | No Hit | |||
| ZN592_HUMAN | -4.09 | 3.98 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | -3.19 | 3.23 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -3.54 | 2.11 | 1.50 | n/a | n/a | |||
| ELF1_HUMAN | -2.92 | 2.98 | 1.00 | 4.00 | Concordant |
Items per page:
1 – 5 of 10
Motif analysis
