rs1869687 chr2:137944146 C>G
- Sequence
atactaccctcctctagaggtcac[C/G]ctagctgccagcttccagtacctt
- ASB in cell types
- GM23338 MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.23 | -0.63 | 1.40 | -1.45 | Weak Concordant |
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Motif analysis
