rs1870073 chr19:55338901 G>A
- Sequence
cagatggtatcagtgtcgttaagg[G/A]aagaatggctgtggcgaaacaaac
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) brain prefrontal cortex region tissues
- ASB for transcription factors
- SRBP2_HUMAN OLIG2_HUMAN E2F1_HUMAN REQU_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 1.65 | 0.38 | 2.25 | n/a | No Hit | |||
| OLIG2_HUMAN | 2.56 | -2.18 | 1.00 | n/a | No Hit | |||
| E2F1_HUMAN | 2.53 | -0.33 | 2.00 | n/a | No Hit | |||
| REQU_HUMAN | 1.12 | -0.20 | 1.40 | n/a | n/a |
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