rs1870735 chr7:155951609 C>G
- Sequence
atcagaggctctgggagaaggctg[C/G]tggtgactcaaggccgggtaacca
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) A549 (lung carcinoma)
- ASB for transcription factors
- JUND_HUMAN PPARG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 2.09 | -0.14 | 1.88 | n/a | No Hit | |||
| PPARG_HUMAN | 1.94 | n/a | 3.00 | 0.43 | Weak Discordant |
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Motif analysis
