rs1870901 chr11:23423241 G>A
- Sequence
cgtacactattgggcagtaacaca[G/A]tcaactgaaataagagaataattc
- ASB in cell types
- naive endoderm
- ASB for transcription factors
- CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDX2_HUMAN | -1.95 | 2.39 | 1.00 | 2.43 | Concordant |
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Motif analysis
Genetic associations
GRASP alzheimers disease, alzheimers disease (apoe4 negative), hypertension (early onset hypertension)