rs1871562 chr12:67593324 C>T
- Sequence
gctttggagctactaaagtctcct[C/T]tggtgccctgaagcttcattactt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- CREB1_HUMAN GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 1.40 | -2.50 | 1.50 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.17 | 0.21 | 1.91 | n/a | No Hit |
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