rs1871856 chr3:14249393 A>G
- Sequence
aggagacttcattggggccgctac[A/G]ggaagacggatgcaacagagaaaa
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SOX13_HUMAN FOXA2_HUMAN SOX5_HUMAN SKI_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX13_HUMAN | 2.38 | -3.87 | 1.50 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.91 | -0.19 | 1.67 | n/a | No Hit | |||
| SOX5_HUMAN | 2.00 | -3.38 | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | 2.38 | -2.07 | 1.00 | n/a | n/a |
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