rs1871924 chr1:83932783 T>A
- Sequence
gtggttgactacatcttctacagc[T/A]gtatgttcctgattacgtttccaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN ARI1B_HUMAN MITF_HUMAN RAD51_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | 3.38 | n/a | 2.00 | -2.11 | Concordant | |||
| ARI1B_HUMAN | 3.00 | n/a | 2.00 | n/a | n/a | |||
| MITF_HUMAN | 2.36 | n/a | 2.00 | n/a | No Hit | |||
| RAD51_HUMAN | 2.63 | 0.39 | 1.50 | n/a | n/a | |||
| MTG8R_HUMAN | 2.63 | -4.96 | 2.00 | n/a | n/a |
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Motif analysis
