rs1872103 chr12:94553239 A>G

Sequence
gcccggtcttgaactcctgacctc[A/G]gatgattcaccagcctcagcctcc
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) MCF10A (breast epithelial cells)
ASB for transcription factors
TCF21_HUMAN P63_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.52 n/a 9.6·10-41.00 2.00 n/a No Hit
P63_HUMAN 2.22 -0.04 1.4·10-31.00 1.12 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa,  Spleen

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