rs1874627 chr16:84898541 C>A

Sequence
agactgaaatggcccctccctagg[C/A]agcgttctccaccatccagcctgc
ASB in cell types
keratinocytes
ASB for transcription factors
SNAI2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 2.81 -4.81 9.4·10-41.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  parkinsons disease,  recurrent early onset major depressive disorder,  recurrent early onset major depressive disorder (females),  recurrent early onset major depressive disorder (males),  triglycerides
GTEx eQTL Whole_Blood

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