rs1875043 chr17:27293555 A>G
- Sequence
ttggccaggacaaaggcagtccag[A/G]gaggccccgcggcgcggtgcggcg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.73 | 0.68 | 1.03 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (geographic atrophy), hdl cholesterol, height, ldl cholesterol, microalbuminuria, total cholesterol, urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Testis, Thyroid