rs1875107 chr3:177449588 T>C
- Sequence
atgggatgaattcctgtagaaagc[T/C]gcaatgtgctgtaaacagggccag
- ASB in cell types
- Detroit 562 (Pharyngeal squamous cell carcinoma) breast tumor LHSAR (prostate epithelial cells) CD14+ monocytes
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN ANDR_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.12 | 1.37 | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | -2.21 | 3.00 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -1.09 | 2.91 | 2.50 | n/a | No Hit | |||
| FOXA2_HUMAN | -0.90 | 1.76 | 1.11 | n/a | No Hit |
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