rs1875782 chr2:179031799 A>G
- Sequence
atagcctatggtatcactgaacct[A/G]agaatctcaggcactcaaagcagt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CRL7250(fibroblast)
- ASB for transcription factors
- FOXK2_HUMAN SSXT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.81 | n/a | 1.50 | n/a | No Hit | |||
| SSXT_HUMAN | 2.73 | -2.47 | 1.00 | n/a | n/a |
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