rs1875914 chr7:42691467 G>A

Sequence
acccaagcgctcgcctactttccc[G/A]gacccactcctgctgtccagagtc
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.60 1.46 1.000.03 1.08 0.34 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GRASP adiponectin levels,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  fasting blood glucose,  simpson-angus scale,  tardive dyskinesia
GTEx eQTL Whole_Blood

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