rs1877444 chr11:1839995 C>A
- Sequence
ccgctggcaaaagtgccccaccca[C/A]ccaccaagacgctgctgaaagaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) THP-1 (acute monocytic leukemia) MV-4-11 (Childhood acute monocytic leukemia) CD34+ hematopoietic stem progenitor cells
- ASB for transcription factors
- CDK9_HUMAN STAG1_HUMAN TF65_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -1.14 | 2.21 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -0.85 | 1.49 | 1.00 | n/a | n/a | |||
| TF65_HUMAN | 2.12 | n/a | 2.50 | n/a | No Hit |
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