rs1877484 chr12:121672864 A>G
- Sequence
ctcactgcaacctccgcctcccgg[A/G]ttcaagccattctccctgcttcag
- ASB in cell types
- HEK293 (embryonic kidney) primary B-CLL cells
- ASB for transcription factors
- ZBT21_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT21_HUMAN | 2.47 | n/a | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.69 | -0.76 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Ovary, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood