rs1877527 chr12:71011426 C>T

Sequence
tgagttatgctgcatattaatgca[C/T]tgcatccacaaactgactcattca
ASB in cell types
SUM159PT (Triple negative breast cancer)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SUM159PT (Triple negative breast cancer) -0.61 1.21 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Artery_Tibial,  Colon_Transverse,  Liver,  Muscle_Skeletal,  Nerve_Tibial,  Small_Intestine_Terminal_Ileum,  Testis

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