rs1877913 chr7:99040832 G>C

Sequence
cagaggagccccgtgttcagcaat[G/C]actgagaatttcaccttcgtgaca
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.67 1.19 1.000.01 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  microalbuminuria,  total cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Hypothalamus,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Colon_Transverse,  Lung,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Thyroid

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