rs189842794 chr1:9292749 G>T
- Sequence
cgcgccccgcgccccgcgccccgc[G/T]cccccggccttccctgcagtgctg
- ASB in cell types
- HEK293 (embryonic kidney) HUVEC-C (HUVEC, umbilical vein endothelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZFHX2_HUMAN PRDM9_HUMAN ZBT26_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | n/a | 3.82 | 2.00 | n/a | n/a | |||
| PRDM9_HUMAN | -0.98 | 2.25 | 2.00 | n/a | No Hit | |||
| ZBT26_HUMAN | n/a | 2.18 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.60 | -1.82 | 2.00 | n/a | No Hit |
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