rs192133 chr11:64473069 A>G

Sequence
agaaagataaagtaaaaaaccgaa[A/G]ccaactggcccaaaccaatagatg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN HTF4_HUMAN COT1_HUMAN CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 2.33 n/a 2.9·10-41.00 2.00 n/a n/a
HTF4_HUMAN 2.20 -0.48 8.5·10-40.94 2.00 n/a No Hit
COT1_HUMAN 2.56 n/a 1.1·10-31.00 2.00 n/a No Hit
CEBPB_HUMAN 2.71 -0.48 4.5·10-30.96 2.00 n/a No Hit
REQU_HUMAN 2.27 -1.75 0.021.00 4.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP refractive error,  serum urate
GTEx eQTL Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Testis

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