ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs195056
chr6:119324888
T
>
C
Sequence
tttggggggttggggagggcagcc[T/C]tgtgcatttttggacgcagagtgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
FOXM1_HUMAN
HDAC1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXM1_HUMAN
3.09
n/a
4.0·10
-3
1.00
2.00
n/a
No Hit
HDAC1_HUMAN
2.27
-0.23
0.02
1.00
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Breast_Mammary_Tissue
,
Spleen
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)