ADASTRA v6.1.0
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rs196343
chr10:119658445
A
>
G
Sequence
agctgagtgctctcactctcgtgt[A/G]ccctgcctggctggcctgatgact
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
RAD21_HUMAN
REQU_HUMAN
ARI4B_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
-0.11
1.93
0.98
0.02
1.77
n/a
n/a
REQU_HUMAN
2.12
0.25
0.04
0.79
1.20
n/a
n/a
ARI4B_HUMAN
2.30
-1.98
0.05
1.00
1.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
cystatin c in serum
,
obesity with early age of onset (age >2)
,
total cholesterol change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)