rs1965999 chr1:40374624 T>A
- Sequence
tgtgtgtgtgtgtgtgtgtgtgtg[T/A]gagagagagagagagagaatgacg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) neural cell GM01310 ( Transformed lymphovlasoid cell line ) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- TADBP_HUMAN EP300_HUMAN STAG1_HUMAN AHR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TADBP_HUMAN | -2.55 | 2.84 | 1.00 | n/a | n/a | |||
| EP300_HUMAN | -3.87 | 3.76 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.84 | 2.31 | 1.00 | n/a | n/a | |||
| AHR_HUMAN | -3.73 | 3.77 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | -2.15 | 2.15 | 1.00 | n/a | No Hit |
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