rs196604 chr7:36292173 C>T

Sequence
gtgccccgtgccaggcgcttctgg[C/T]ggctcctctaatcctgacaccaac
ASB in cell types
HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
TBX3_HUMAN SOX5_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX3_HUMAN 2.66 -2.62 1.2·10-31.00 1.00 n/a No Hit
SOX5_HUMAN 2.65 n/a 0.011.00 1.00 n/a No Hit
ANDR_HUMAN 2.06 -0.69 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose eye color

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