ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs196604
chr7:36292173
C
>
T
Sequence
gtgccccgtgccaggcgcttctgg[C/T]ggctcctctaatcctgacaccaac
ASB in cell types
HepG2 (hepatoblastoma)
22RV1 (prostate carcinoma)
ASB for transcription factors
TBX3_HUMAN
SOX5_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX3_HUMAN
2.66
-2.62
1.2·10
-3
1.00
1.00
n/a
No Hit
SOX5_HUMAN
2.65
n/a
0.01
1.00
1.00
n/a
No Hit
ANDR_HUMAN
2.06
-0.69
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
eye color
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)